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Refereed Publications:


  1. Kai Willadsen, Minh Duc Cao, Janet Wiles, Sureshkumar Balasubramanian, Mikael Boden, Repeat-encoded Poly-Q Tracts Show Statistical Commonalities Across Species, BMC Genomics, 14:1(76), 2013. URL
  2. Minh Duc Cao and Ingrid Zukerman, Experimental Evaluation of a Lexicon- and Corpus-based Ensemble for Multi-way Sentiment Analysis, In: Proceedings of the Australasian Language Technology Association Workshop 2012 (ALTA'12), Dunedin, New Zealand, pages 52-60. 2012. URL
  3. Minh Duc Cao, Trevor I. Dix and Lloyd Allison, A Biological Compression Model and its Applications, book chapter in: Software Tools and Algorithms for Biological Systems, Springer, Volume 696, Part 8, pages 657-666. 2011. URL
  4. Minh Duc Cao, Trevor I. Dix and Lloyd Allison, A Genome Alignment Algorithm Based on Compression, BMC Bioinformatics, 11:599, 2010. URL
  5. Minh Duc Cao, Lloyd Allison and Trevor I. Dix, A Distance Measure for Genome Phylogenetic Analysis, in: Proceedings of the 22rd Australian Joint Conference on Artificial Intelligence (AI 2009), Melbourne, Australia, pages 71--80, 2009. URL
  6. Minh Duc Cao, Trevor I. Dix and Lloyd Allison, Computing Substitution Matrices for Genomic Comparative Analysis, in: Proceedings of the 13th Pacific-Asia Conference on Knowledge Discovery and Data Mining (PAKDD 2009), Bangkok, Thailand, pages 647-655, 2009. URL
  7. Minh Duc Cao, Trevor I. Dix, Lloyd Allison and Chris Mears, A Simple Statistical Algorithm for Biological Sequence Compression, in: Proceedings of the Data Compression Conference 2007 (DCC 2007), Salk Lake city, USA, pages 43-52, 2007. URL
  8. Mengjie Zhang, Xiaoying Gao, Minh Duc Cao and Yuejin Ma, Modelling Citation Networks for Improving Scientific Paper Classification Performance, in: Proceedings of the 9th Pacific Rim International Conferences on Artificial Intelligence (PRICAI 2006), Guilin, China, pages 413-422, 2006. URL
  9. Mengjie Zhang, Xiaoying Gao, Minh Duc Cao and Yuejin Ma, Neural Networks for Scientific Paper Classification, In: the First International Conference on Innovative Computing, Information and Control (ICICIC 2006), Beijing, China, pages 51-54, 2006. URL
  10. Xiaoying Gao, Minh Duc Cao, TreeWrapper: Automatic Data Extraction Based on Tree Representation, in: Proceedings of the 19th Australian Conference on Artificial Intelligence (AI 2006), Hobart, Australia, pages 566-576, 2006. URL
  11. Minh Duc Cao and Xiaoying Gao, Combining Contents and Citations for Scientific Document Classification, in: Proceedings of the 18th Australian Conference on Artificial Intelligence (AI 2005), Sydney, Australia,, pages 143-152, 2005. URL

Other publications:


  1. Minh Duc Cao, Trevor I. Dix and Lloyd Allison, A Genome Alignment Algorithm Based on Compression, Technical Report, Faculty of Information Technology, Monash University, No. 2009/233, 2009. http://www.csse.monash.edu.au/publications/2009/tr-2009-233-abs.html
  2. Minh Duc Cao, Trevor I. Dix and Lloyd Allison, A Distance Measure for Phylogenetic Analysis of Genomes, Poster in: The 19th International Conference on Genomic Informatics, Gold Coast, Australia,, 2008.
  3. Minh Duc Cao, Trevor I. Dix, Lloyd Allison and Chris Mears, A Fast Statistical Biological Sequence Compressor for Pattern Discovery, Technical Report, Faculty of Information Technology, Monash University, No. 2006/203, 2006. http://www.csse.monash.edu.au/publications/2006/tr-2006-203-abs.html
  4. Mengjie Zhang, Xiaoying Gao and Minh Duc Cao, Scientific Paper Classification using Neural Networks, Technical Report, School of Mathematics, Statistics and Computer Science, Victoria University of Wellington, No. CS-TR-06-9, 2006. http://www.mcs.vuw.ac.nz/comp/Publications/CS-TR-06-9.abs.html
  5. Minh Duc Cao, Xiaoying Gao and Mengjie Zhang, Improving Scientific Paper Classification Performance by Modelling Citation Networks, Technical Report, School of Mathematics, Statistics and Computer Science, Victoria University of Wellington, No. CS-TR-06-5, 2006. http://www.mcs.vuw.ac.nz/comp/Publications/CS-TR-06-5.abs.html
  6. Minh Duc Cao, Xiaoying Gao and Mengjie Zhang, Citation-based Text Classification, Technical Report, School of Mathematics, Statistics and Computer Science, Victoria University of Wellington, No. CS-TR-05-7, 2005. http://www.mcs.vuw.ac.nz/comp/Publications/CS-TR-05-7.abs.html

Theses:

  1. Minh Duc Cao, Information Theoretic Approaches to Biological Sequence Analyses, PhD Thesis, Submitted May 2010, accepted October 2010, Monash University. Available online here
  2. Minh Duc Cao, Classification of Scientific Papers Using Machine Learning, Honours Thesis, Accepted 2005, Victoria University of Wellington. Available online here

Presentations:


  1. A Distance Measure for Genome Phylogenetic Analysis, at AI'09 Conference, Dec 2009. [Slides]
  2. Biological Compression and its Applications, at NICTA, May 2009.
  3. Biological Compression, at the CRIS PostGrad Lunchtime Series, FIT, Monash, Jan 2009.
  4. A Biological Compression Algorithm and its Applications to Phylogenetics, at Biomaths Conference 08, Mar 2008.
  5. A Fast Statistical Biological Sequence Compressor for Pattern Discovery, at ICE-EM Summer Symposium in Bioinformatics Summer School (BioInfoSummer 2007), ANU, Dec 2007.